A PostgreSQL extension adding 2 datatypes of 2-bit or 4-bit per 1-mer for nucleotide sequence data and GIN index based on k-mer
pgext.cloud · Source code · Documentation · Control file
| Package | pg_kmersearch |
|---|---|
| Version | 1.0 |
| Repository | Unspecified |
| Extension type | Standard |
| Project status | Active |
| Requires CREATE EXTENSION | Yes |
| Requires preload | No |
| Trusted | No |
| Relocatable | Yes |
| Stars | 0 |
| Latest commit | 2026-02-02 |
| Catalogue updated | 2026-08-30 |
| kmea | K-Mer Extension for Analysis |
| parray_gin | GIN index operator class and partial-match operators for text arrays |
| rdkit | Cheminformatics functionality for PostgreSQL. |
| pgchy_similarity | Chemical structure similarity functions for PostgreSQL using Chython and PL/Python. |
| gevel | Index-inspection functions for GiST, GIN, SP-GiST, B-tree, and BRIN indexes. |
| rum | RUM index access method |
| mtree | Metric-space index access method derived from PostgreSQL GiST |
| pg_turboquant | Compact TurboQuant approximate-nearest-neighbor index access method for pgvector vector and halfvec data. |